ClinVar Miner

Submissions for variant NM_000153.4(GALC):c.119G>A (p.Gly40Asp)

dbSNP: rs572947747
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Counsyl RCV000674795 SCV000800193 uncertain significance Galactosylceramide beta-galactosidase deficiency 2018-05-24 criteria provided, single submitter clinical testing
Invitae RCV000674795 SCV003497672 uncertain significance Galactosylceramide beta-galactosidase deficiency 2022-04-29 criteria provided, single submitter clinical testing This sequence change replaces glycine, which is neutral and non-polar, with aspartic acid, which is acidic and polar, at codon 40 of the GALC protein (p.Gly40Asp). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with GALC-related conditions. ClinVar contains an entry for this variant (Variation ID: 558513). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt GALC protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002532166 SCV003685045 uncertain significance Inborn genetic diseases 2021-06-22 criteria provided, single submitter clinical testing The c.119G>A (p.G40D) alteration is located in exon 1 (coding exon 1) of the GALC gene. This alteration results from a G to A substitution at nucleotide position 119, causing the glycine (G) at amino acid position 40 to be replaced by an aspartic acid (D). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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