ClinVar Miner

Submissions for variant NM_000155.4(GALT):c.902A>G (p.His301Arg)

dbSNP: rs886042065
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000590154 SCV000330960 uncertain significance not provided 2015-09-29 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000590154 SCV000695708 uncertain significance not provided 2016-12-07 criteria provided, single submitter clinical testing Variant summary: The GALT c.902A>G (p.His301Arg) variant located in the galactose-1-phosphate uridyl transferase, C-terminal domain (via InterPro) causes a missense change involving a conserved nucleotide, which 4/4 in silico tools (SNPs&GO not captured due to low reliability index) predict a damaging outcome, although these predictions have yet to be functionally assessed. The variant is located in the C-terminal HIT-like domain, and specifically the iron-binding site (Glu182, His281, His299, His301) has been suggested to stabilize the structure of the protein (PMID: 10529216). However, this missense change has not been evaluated for functional impact by in vivo/vitro studies. This variant was not observed in controls (ExAC, 1000 Gs, or ESP). A publication cites the variant with limited information (ie lack of phenotypic, co-occurrence and cosegregation data) but classifies the variant as a "variant of uncertain significance," which is from the same clinical diagnostic laboratory that cites the variant. Therefore, until additional information becomes available (ie, clinical and functional studies), the variant of interest has been classified as a "Variant of Uncertain Significance (VUS)."

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