ClinVar Miner

Submissions for variant NM_000158.4(GBE1):c.429+5T>G

gnomAD frequency: 0.00014  dbSNP: rs373240805
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV002537766 SCV003443610 uncertain significance Glycogen storage disease, type IV; Glycogen storage disease IV, classic hepatic 2022-04-23 criteria provided, single submitter clinical testing This sequence change falls in intron 3 of the GBE1 gene. It does not directly change the encoded amino acid sequence of the GBE1 protein. It affects a nucleotide within the consensus splice site. This variant is present in population databases (rs373240805, gnomAD 0.08%). This variant has not been reported in the literature in individuals affected with GBE1-related conditions. ClinVar contains an entry for this variant (Variation ID: 989811). Variants that disrupt the consensus splice site are a relatively common cause of aberrant splicing (PMID: 17576681, 9536098). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant is not likely to affect RNA splicing. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Natera, Inc. RCV001277708 SCV001464675 uncertain significance Glycogen storage disease, type IV 2020-06-10 no assertion criteria provided clinical testing

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