Total submissions: 1
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Gene |
RCV000414290 | SCV000491336 | likely pathogenic | not provided | 2016-07-01 | criteria provided, single submitter | clinical testing | The F235L variant in the GLRA1 gene has been reported previously in two siblings with hyperekplexia who were compound heterozygous for another missense variant (Ursitti et al., 2014). The F235L variant was not observed in approximately 6500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. The F235L variant is a conservative amino acid substitution, which is not likely to impact secondary protein structure as these residues share similar properties. However, this substitution occurs at a position that is conserved across species. The F235L variant is located in the disulfide bond region and strychnine-binding region of the protein. In silico analysis predicts this variant is probably damaging to the protein structure/function. The F235L variant is a strong candidate for a pathogenic variant, however the possibility it may be a rare benign variant cannot be excluded. |