Total submissions: 1
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Gene |
RCV000486352 | SCV000571947 | likely pathogenic | not provided | 2016-10-17 | criteria provided, single submitter | clinical testing | The A316E variant in the GLRA1 gene has not been reported previously as a pathogenic variant nor as abenign variant, to our knowledge. The A316E variant was not observed in approximately 6500 individuals ofEuropean and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a commonbenign variant in these populations. The A316E variant is a non-conservative amino acid substitution, which islikely to impact secondary protein structure as these residues differ in polarity, charge, size and/or other properties.This substitution occurs at a position that is conserved across species. In silico analysis predicts this variant isprobably damaging to the protein structure/function. Missense variants in a nearby residue, L319P, has been reportedin the Human Gene Mutation Database in association with hyperekplexia (Stenson et al., 2014), supporting thefunctional importance of this region of the protein. The A316E variant is a strong candidate for a pathogenic variant. |