ClinVar Miner

Submissions for variant NM_000179.3(MSH6):c.2473del (p.Ile825fs)

dbSNP: rs1669467747
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001057010 SCV001221479 pathogenic Hereditary nonpolyposis colorectal neoplasms 2019-03-28 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. Loss-of-function variants in MSH6 are known to be pathogenic (PMID: 18269114, 24362816). This variant has not been reported in the literature in individuals with MSH6-related conditions. This variant is not present in population databases (ExAC no frequency). This sequence change creates a premature translational stop signal (p.Ile825Phefs*8) in the MSH6 gene. It is expected to result in an absent or disrupted protein product.
Ambry Genetics RCV002451233 SCV002738291 pathogenic Hereditary cancer-predisposing syndrome 2018-10-11 criteria provided, single submitter clinical testing The c.2473delA pathogenic mutation, located in coding exon 4 of the MSH6 gene, results from a deletion of one nucleotide at nucleotide position 2473, causing a translational frameshift with a predicted alternate stop codon (p.I825Ffs*8). This alteration is expected to result in loss of function by premature protein truncation or nonsense-mediated mRNA decay. As such, this alteration is interpreted as a disease-causing mutation.

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