ClinVar Miner

Submissions for variant NM_000182.5(HADHA):c.652G>C (p.Val218Leu)

gnomAD frequency: 0.00050  dbSNP: rs71441018
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Total submissions: 11
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000691764 SCV000819554 likely benign Mitochondrial trifunctional protein deficiency; Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency 2024-01-27 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV000691764 SCV000896992 uncertain significance Mitochondrial trifunctional protein deficiency; Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency 2018-10-31 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV000859471 SCV001152189 uncertain significance not provided 2024-07-01 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV001142927 SCV001303421 uncertain significance Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
Illumina Laboratory Services, Illumina RCV001142928 SCV001303422 uncertain significance Mitochondrial trifunctional protein deficiency 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
Genome-Nilou Lab RCV001142927 SCV001653343 uncertain significance Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency 2021-05-18 criteria provided, single submitter clinical testing
Pars Genome Lab RCV001142927 SCV001736833 uncertain significance Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency 2021-05-18 criteria provided, single submitter clinical testing
GeneDx RCV000859471 SCV001788912 uncertain significance not provided 2021-04-20 criteria provided, single submitter clinical testing In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; Reported with a high frequency of heterozygous individuals in the Silesian region of Poland in published literature (Nedoszytko et al., 2017); This variant is associated with the following publications: (PMID: 29095929)
Revvity Omics, Revvity RCV000859471 SCV003810644 uncertain significance not provided 2022-05-30 criteria provided, single submitter clinical testing
Mayo Clinic Laboratories, Mayo Clinic RCV000859471 SCV004224855 uncertain significance not provided 2022-01-10 criteria provided, single submitter clinical testing
Center for Genomic Medicine, King Faisal Specialist Hospital and Research Center RCV003992371 SCV004809496 uncertain significance Mitochondrial trifunctional protein deficiency 1 2024-04-04 criteria provided, single submitter clinical testing

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