ClinVar Miner

Submissions for variant NM_000203.5(IDUA):c.1340G>A (p.Arg447His)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV002387705 SCV002692332 uncertain significance Inborn genetic diseases 2022-03-25 criteria provided, single submitter clinical testing The p.R447H variant (also known as c.1340G>A), located in coding exon 9 of the IDUA gene, results from a G to A substitution at nucleotide position 1340. The arginine at codon 447 is replaced by histidine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Labcorp Genetics (formerly Invitae), Labcorp RCV003094998 SCV003452787 uncertain significance Mucopolysaccharidosis type 1 2024-10-16 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with histidine, which is basic and polar, at codon 447 of the IDUA protein (p.Arg447His). The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the gnomAD database. This variant has not been reported in the literature in individuals affected with IDUA-related conditions. ClinVar contains an entry for this variant (Variation ID: 1770357). An algorithm developed to predict the effect of missense changes on protein structure and function outputs the following: PolyPhen-2: "Benign". The histidine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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