ClinVar Miner

Submissions for variant NM_000209.4(PDX1):c.165C>A (p.Gly55=)

gnomAD frequency: 0.00078  dbSNP: rs530567443
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000615233 SCV000732140 likely benign not specified 2017-02-08 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Athena Diagnostics Inc RCV000711998 SCV000842411 benign not provided 2017-12-15 criteria provided, single submitter clinical testing
Invitae RCV000711998 SCV001043381 benign not provided 2024-01-15 criteria provided, single submitter clinical testing
Genetic Services Laboratory, University of Chicago RCV000615233 SCV002068162 likely benign not specified 2020-03-16 criteria provided, single submitter clinical testing
Ambry Genetics RCV002404702 SCV002707506 likely benign Maturity onset diabetes mellitus in young 2019-03-22 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000711998 SCV004563184 likely benign not provided 2023-10-23 criteria provided, single submitter clinical testing

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