Submissions for variant NM_000217.3(KCNA1):c.1440T>A (p.Thr480=)

gnomAD frequency: 0.75219  dbSNP: rs4766309

Total submissions: 13

Submitter	RCV	SCV	Clinical significance	Condition	Last evaluated	Review status	Method	Comment
Eurofins Ntd Llc (ga)	RCV000117314	SCV000227063	benign	not specified	2015-09-29	criteria provided, single submitter	clinical testing
Illumina Laboratory Services, Illumina	RCV000297286	SCV000379419	benign	Myokymia	2016-06-14	criteria provided, single submitter	clinical testing
Illumina Laboratory Services, Illumina	RCV000606572	SCV000379420	benign	Episodic ataxia type 1	2018-01-13	criteria provided, single submitter	clinical testing	This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center	RCV000606572	SCV000744721	benign	Episodic ataxia type 1	2015-09-21	criteria provided, single submitter	clinical testing
Athena Diagnostics	RCV000712102	SCV000842522	benign	not provided	2018-05-06	criteria provided, single submitter	clinical testing
Labcorp Genetics (formerly Invitae), Labcorp	RCV000606572	SCV001724021	benign	Episodic ataxia type 1	2025-02-04	criteria provided, single submitter	clinical testing
GeneDx	RCV000712102	SCV001834539	benign	not provided	2019-12-12	criteria provided, single submitter	clinical testing
Genome-Nilou Lab	RCV000606572	SCV001980867	benign	Episodic ataxia type 1	2021-08-19	criteria provided, single submitter	clinical testing
Unidad de Genómica Garrahan, Hospital de Pediatría Garrahan	RCV000117314	SCV005091856	benign	not specified	2024-07-31	criteria provided, single submitter	clinical testing	This variant is classified as Benign based on local population frequency. This variant was detected in 89% of patients studied in a panel designed for Epileptic and Developmental Encephalopathy, Progressive Myoclonus Epilepsy and Abnormal Movements and Neurodegeneration with brain iron accumulation. Number of patients: 83. Only high quality variants are reported.
Breakthrough Genomics, Breakthrough Genomics	RCV000712102	SCV005236728	benign	not provided		criteria provided, single submitter	not provided
Genetic Services Laboratory, University of Chicago	RCV000117314	SCV000151495	likely benign	not specified		no assertion criteria provided	clinical testing	Likely benign based on allele frequency in 1000 Genomes Project or ESP global frequency and its presence in a patient with a rare or unrelated disease phenotype. NOT Sanger confirmed.
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen	RCV000606572	SCV000733175	benign	Episodic ataxia type 1		no assertion criteria provided	clinical testing
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+	RCV000117314	SCV001957061	benign	not specified		no assertion criteria provided	clinical testing