Total submissions: 1
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Gene |
RCV001842877 | SCV000234580 | uncertain significance | Cardiac arrhythmia | 2014-08-25 | criteria provided, single submitter | clinical testing | c.1032+5dupG: IVS7+5dupG in intron 7 of the KCNQ1 gene (NM_000218.2). The normal sequence with the base that is inserted in braces is: GTAGG[G]TGCC. The c.1032+5_1032+6insG variant has not been reported as a disease-causing mutation or as a benign polymorphism to our knowledge. The c.1032+5_1032+6insG variant was not observed in approximately 6,500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. Two splice site mutations in the same nucleotide and other splice site mutations in the KCNQ1 gene have been reported in association with LQTS. Furthermore, in silico analysis using different splice algorithms predicts that c.1032+5dupG reduces the efficiency or completely abolishes the splice donor site in intron 7 and therefore may cause abnormal gene splicing. However, in the absence of functional mRNA studies, the physiological consequence of this variant cannot be precisely determined. Therefore, based on the currently available information, it is unclear whether this variant is a pathogenic mutation or a rare benign variant. The variant is found in LQT panel(s). |