ClinVar Miner

Submissions for variant NM_000218.3(KCNQ1):c.355G>C (p.Gly119Arg)

dbSNP: rs1325525794
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Center For Human Genetics And Laboratory Diagnostics, Dr. Klein, Dr. Rost And Colleagues RCV000678948 SCV000805162 pathogenic Long QT syndrome 1 2018-04-08 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000692678 SCV000820514 likely pathogenic Long QT syndrome 2023-09-17 criteria provided, single submitter clinical testing Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt KCNQ1 protein function. Experimental studies have shown that this missense change affects KCNQ1 function (PMID: 30571187, 36674868). In summary, the currently available evidence indicates that the variant is pathogenic, but additional data are needed to prove that conclusively. Therefore, this variant has been classified as Likely Pathogenic. ClinVar contains an entry for this variant (Variation ID: 560702). This sequence change replaces glycine, which is neutral and non-polar, with arginine, which is basic and polar, at codon 119 of the KCNQ1 protein (p.Gly119Arg). This variant is not present in population databases (gnomAD no frequency). This missense change has been observed in individuals with long QT syndrome (PMID: 26669661, 31737537, 32383558, 36674868; Invitae).
CeGaT Center for Human Genetics Tuebingen RCV003886428 SCV004704451 likely pathogenic not provided 2024-02-01 criteria provided, single submitter clinical testing KCNQ1: PM1, PM2, PP2, PP3, PS3:Supporting
Bioscientia Institut fuer Medizinische Diagnostik GmbH, Sonic Healthcare RCV000678948 SCV001468142 uncertain significance Long QT syndrome 1 2020-06-16 no assertion criteria provided clinical testing

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