ClinVar Miner

Submissions for variant NM_000238.4(KCNH2):c.2398+1G>C

dbSNP: rs794728391
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000181858 SCV000234161 pathogenic not provided 2023-07-07 criteria provided, single submitter clinical testing Identified in multiple unrelated patients with LQTS referred for genetic testing at GeneDx or in published literature (Curran et al., 1995; Splawkski et al., 2000; Tester et al., 2005); Not observed at significant frequency in large population cohorts (gnomAD); Canonical splice site variant predicted to result in an in-frame insertion of a critical region; Published functional studies demonstrate a damaging effect as this variant activates a cryptic splice site and generates a full-length hERG protein with an insertion of 18 amino acids in the middle of the cyclic nucleotide binding domain; the mutant channel displays a trafficking defect and causes dominant negative suppression of wild-type channel function by intracellular retention of heteromeric channels (Gong et al., 2008); This variant is associated with the following publications: (PMID: 10973849, 15840476, 18272172, 19862833, 7889573)
OMIM RCV000015503 SCV000035768 pathogenic Long QT syndrome 2 1995-03-10 no assertion criteria provided literature only

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