ClinVar Miner

Submissions for variant NM_000245.4(MET):c.1902C>G (p.Phe634Leu)

dbSNP: rs772450441
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001367764 SCV001564127 uncertain significance Renal cell carcinoma 2024-11-18 criteria provided, single submitter clinical testing This sequence change replaces phenylalanine, which is neutral and non-polar, with leucine, which is neutral and non-polar, at codon 634 of the MET protein (p.Phe634Leu). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with MET-related conditions. ClinVar contains an entry for this variant (Variation ID: 1058604). An algorithm developed to predict the effect of missense changes on protein structure and function outputs the following: PolyPhen-2: "Benign". The leucine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002413878 SCV002721988 uncertain significance Hereditary cancer-predisposing syndrome 2024-09-09 criteria provided, single submitter clinical testing The p.F634L variant (also known as c.1902C>G), located in coding exon 6 of the MET gene, results from a C to G substitution at nucleotide position 1902. The phenylalanine at codon 634 is replaced by leucine, an amino acid with highly similar properties. This amino acid position is well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Based on the available evidence, the clinical significance of this variant remains unclear.

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