Total submissions: 1
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Neuberg Centre For Genomic Medicine, |
RCV003337808 | SCV004048129 | uncertain significance | Papillary renal cell carcinoma type 1 | criteria provided, single submitter | clinical testing | The splice site c.2941+1G>T variant has not been reported previously as a pathogenic variant nor as a benign variant, to our knowledge. The variant is novel (not in any individuals) in 1000 Genomes and in gnomAD. The nucleotide change in MET is predicted as conserved by GERP++ and PhyloP across 100 vertebrates. Since the above variant affects an invariable splice nucleotide it is expected to cause protein truncation. MET germline variants have not been reported previously in breast cancer. Somatic overexpression of MET proto-oncogene has been observed in breast cancer. Hence the above variant has been classified as Uncertain Significance |