ClinVar Miner

Submissions for variant NM_000245.4(MET):c.4145G>C (p.Arg1382Pro)

dbSNP: rs752694306
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000690299 SCV000817981 uncertain significance Renal cell carcinoma 2023-10-08 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with proline, which is neutral and non-polar, at codon 1400 of the MET protein (p.Arg1400Pro). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with MET-related conditions. ClinVar contains an entry for this variant (Variation ID: 569622). Experimental studies and prediction algorithms are not available or were not evaluated, and the functional significance of this variant is currently unknown. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
GeneDx RCV001775962 SCV002013011 uncertain significance not provided 2022-08-03 criteria provided, single submitter clinical testing Not observed at significant frequency in large population cohorts (gnomAD); In silico analysis supports that this missense variant does not alter protein structure/function; Has not been previously published as pathogenic or benign to our knowledge
Ambry Genetics RCV002332423 SCV002629913 uncertain significance Hereditary cancer-predisposing syndrome 2023-09-21 criteria provided, single submitter clinical testing The p.R1400P variant (also known as c.4199G>C), located in coding exon 20 of the MET gene, results from a G to C substitution at nucleotide position 4199. The arginine at codon 1400 is replaced by proline, an amino acid with dissimilar properties. This amino acid position is poorly conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Baylor Genetics RCV003465576 SCV004192453 uncertain significance Autosomal recessive nonsyndromic hearing loss 97 2023-10-25 criteria provided, single submitter clinical testing

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