ClinVar Miner

Submissions for variant NM_000251.3(MSH2):c.367-2_645+1del

dbSNP: rs2104016560
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Department of Pathology and Laboratory Medicine, Sinai Health System RCV001357072 SCV001552408 pathogenic Carcinoma of colon no assertion criteria provided clinical testing The c.367-?_645+?del alteration has been previously reported by our laboratory in three families with Lynch syndrome. This alteration is predicted to cause a deletion of EXON03 and to result in a frameshift, a truncated or absent protein and loss of function. Loss of function variants of the MSH2 gene are an established mechanism of disease for Lynch syndrome. Please note, the precise breakpoints of this deletion were not determined and further study would be necessary to confirm the effect of this alteration at the mRNA or protein level. In summary, based on the above information, this variant meets our laboratory's criteria to be classified as pathogenic.

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