ClinVar Miner

Submissions for variant NM_000254.3(MTR):c.3144A>G (p.Ala1048=)

gnomAD frequency: 0.34551  dbSNP: rs2229276
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000126869 SCV000170398 benign not specified 2013-09-09 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Illumina Laboratory Services, Illumina RCV000366897 SCV000356048 benign Disorders of Intracellular Cobalamin Metabolism 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Invitae RCV001517611 SCV001726145 benign Methylcobalamin deficiency type cblG 2024-02-01 criteria provided, single submitter clinical testing
Genome-Nilou Lab RCV001517611 SCV002014286 benign Methylcobalamin deficiency type cblG 2021-09-05 criteria provided, single submitter clinical testing
Clinical Genetics, Academic Medical Center RCV000126869 SCV001925535 benign not specified no assertion criteria provided clinical testing
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen RCV000126869 SCV001962795 benign not specified no assertion criteria provided clinical testing

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