ClinVar Miner

Submissions for variant NM_000261.2(MYOC):c.38C>T (p.Pro13Leu)

dbSNP: rs2527874462
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
ClinGen Glaucoma Variant Curation Expert Panel RCV002280342 SCV002568389 uncertain significance Glaucoma 1, open angle, E 2022-08-28 reviewed by expert panel curation The c.38C>T variant in MYOC is a missense variant predicted to cause substitution of Proline by Leucine at amino acid 13 (p.Pro13Leu). This variant was not found in any population of gnomAD (v2.1.1), meeting the <= 0.0001 threshold set for PM2_Supporting in a population of at least 10,000 alleles. The REVEL score = 0.278, which was neither above nor below the thresholds for PP3 (>= 0.7) or BP4 (<= 0.15), predicting a damaging or benign impact on MYOC function. There was no functional evidence predicting a damaging or benign impact of this variant on MYOC function. No segregations have been reported in individuals carrying this variant and no other MYOC variant. Only 1 proband with POAG had been reported (PMID: 18776955), but he also carried the variant of uncertain significance p.Gln337ArgfsTer9 and therefore was not counted. In summary, this variant met the criteria to receive a score of 1 and to be classified as a variant of uncertain significance (uncertain significance classification range -1 to 5) for primary open angle glaucoma based on the ACMG/AMP criteria met, as specified by the ClinGen Glaucoma VCEP (v1, 12 Oct 2021): PM2_Supporting.

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