ClinVar Miner

Submissions for variant NM_000264.5(PTCH1):c.3150C>T (p.Pro1050=)

gnomAD frequency: 0.00021  dbSNP: rs149398794
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000205907 SCV000260879 benign Gorlin syndrome 2024-01-29 criteria provided, single submitter clinical testing
GeneDx RCV000438534 SCV000514301 benign not specified 2015-03-26 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Ambry Genetics RCV000571406 SCV000674470 likely benign Hereditary cancer-predisposing syndrome 2017-02-14 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Sema4, Sema4 RCV000571406 SCV002526877 benign Hereditary cancer-predisposing syndrome 2021-05-05 criteria provided, single submitter curation
KCCC/NGS Laboratory, Kuwait Cancer Control Center RCV000205907 SCV004017157 benign Gorlin syndrome 2023-07-07 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV004547488 SCV004777515 likely benign PTCH1-related disorder 2021-12-30 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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