ClinVar Miner

Submissions for variant NM_000268.4(NF2):c.1691A>G (p.Glu564Gly)

gnomAD frequency: 0.00001  dbSNP: rs1416009957
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002037281 SCV002114069 uncertain significance Neurofibromatosis, type 2 2022-08-10 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated. ClinVar contains an entry for this variant (Variation ID: 1345426). This variant has not been reported in the literature in individuals affected with NF2-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces glutamic acid, which is acidic and polar, with glycine, which is neutral and non-polar, at codon 564 of the NF2 protein (p.Glu564Gly).
Ambry Genetics RCV002406910 SCV002715381 uncertain significance Hereditary cancer-predisposing syndrome 2022-02-05 criteria provided, single submitter clinical testing The p.E564G variant (also known as c.1691A>G), located in coding exon 15 of the NF2 gene, results from an A to G substitution at nucleotide position 1691. The glutamic acid at codon 564 is replaced by glycine, an amino acid with similar properties. This amino acid position is conserved. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
All of Us Research Program, National Institutes of Health RCV002037281 SCV004829949 uncertain significance Neurofibromatosis, type 2 2023-11-30 criteria provided, single submitter clinical testing

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