ClinVar Miner

Submissions for variant NM_000289.6(PFKM):c.2327G>A (p.Gly776Glu)

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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV002920744 SCV003664170 uncertain significance Inborn genetic diseases 2022-11-08 criteria provided, single submitter clinical testing The c.2327G>A (p.G776E) alteration is located in exon 23 (coding exon 22) of the PFKM gene. This alteration results from a G to A substitution at nucleotide position 2327, causing the glycine (G) at amino acid position 776 to be replaced by a glutamic acid (E). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.
Labcorp Genetics (formerly Invitae), Labcorp RCV003111717 SCV003786318 uncertain significance Glycogen storage disease, type VII 2022-06-22 criteria provided, single submitter clinical testing This sequence change replaces glycine, which is neutral and non-polar, with glutamic acid, which is acidic and polar, at codon 776 of the PFKM protein (p.Gly776Glu). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with PFKM-related conditions. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
GeneDx RCV003328721 SCV004035891 uncertain significance not provided 2023-09-07 criteria provided, single submitter clinical testing Has not been previously published as pathogenic or benign to our knowledge; Not observed at significant frequency in large population cohorts (gnomAD); In silico analysis supports that this missense variant does not alter protein structure/function

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