ClinVar Miner

Submissions for variant NM_000308.4(CTSA):c.1359+6G>T

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002966211 SCV003276982 uncertain significance Combined deficiency of sialidase AND beta galactosidase 2022-08-29 criteria provided, single submitter clinical testing This sequence change falls in intron 14 of the CTSA gene. It does not directly change the encoded amino acid sequence of the CTSA protein. It affects a nucleotide within the consensus splice site. This variant is present in population databases (rs375030709, gnomAD 0.009%). This variant has not been reported in the literature in individuals affected with CTSA-related conditions. Variants that disrupt the consensus splice site are a relatively common cause of aberrant splicing (PMID: 17576681, 9536098). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant is not likely to affect RNA splicing. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV004700870 SCV005204751 uncertain significance not specified 2024-06-17 criteria provided, single submitter clinical testing

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