ClinVar Miner

Submissions for variant NM_000311.5(PRNP):c.655G>A (p.Glu219Lys)

gnomAD frequency: 0.00092  dbSNP: rs1800014
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Illumina Laboratory Services, Illumina RCV000020257 SCV000434232 benign Inherited prion disease 2018-03-06 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV000873683 SCV001015725 benign Huntington disease-like 1 2024-01-19 criteria provided, single submitter clinical testing
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV001573203 SCV001474173 benign not provided 2022-02-05 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV001573203 SCV005309448 benign not provided criteria provided, single submitter not provided
OMIM RCV004577713 SCV000034599 uncertain significance Reclassified - variant of unknown significance 2012-02-01 no assertion criteria provided literature only
Laboratory of Diagnostic Genome Analysis, Leiden University Medical Center (LUMC) RCV001573203 SCV001798698 likely benign not provided no assertion criteria provided clinical testing
Genome Diagnostics Laboratory, Amsterdam University Medical Center RCV001573203 SCV001807093 likely benign not provided no assertion criteria provided clinical testing

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