ClinVar Miner

Submissions for variant NM_000321.3(RB1):c.1410T>G (p.Ile470Met)

dbSNP: rs578226820
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000812984 SCV000953314 benign Retinoblastoma 2024-12-29 criteria provided, single submitter clinical testing
Sema4, Sema4 RCV002255534 SCV002528292 uncertain significance Hereditary cancer-predisposing syndrome 2021-05-20 criteria provided, single submitter curation
Ambry Genetics RCV002255534 SCV002700350 uncertain significance Hereditary cancer-predisposing syndrome 2024-03-15 criteria provided, single submitter clinical testing The p.I470M variant (also known as c.1410T>G), located in coding exon 15 of the RB1 gene, results from a T to G substitution at nucleotide position 1410. The isoleucine at codon 470 is replaced by methionine, an amino acid with highly similar properties. Although this particular variant has not been reported in the literature, a different amino acid change at this same position (p.Ile470Phe) has been reported in two Chinese patients with unilateral retinoblastoma (Li T et al. Int J Clin Exp Pathol 2016;9(2):2120-2126). This amino acid position is not well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Baylor Genetics RCV003461212 SCV004208527 uncertain significance Malignant tumor of urinary bladder 2023-07-28 criteria provided, single submitter clinical testing
All of Us Research Program, National Institutes of Health RCV000812984 SCV004844669 uncertain significance Retinoblastoma 2024-09-27 criteria provided, single submitter clinical testing This missense variant replaces isoleucine with methionine at codon 470 of the RB1 protein. Computational prediction suggests that this variant may not impact protein structure and function (internally defined REVEL score threshold <= 0.5, PMID: 27666373). To our knowledge, functional studies have not been reported for this variant. This variant has not been reported in individuals affected with RB1-related disorders in the literature. This variant has been identified in 2/163858 chromosomes in the general population by the Genome Aggregation Database (gnomAD). The available evidence is insufficient to determine the role of this variant in disease conclusively. Therefore, this variant is classified as a Variant of Uncertain Significance.

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