ClinVar Miner

Submissions for variant NM_000321.3(RB1):c.2246A>G (p.Tyr749Cys)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV002420211 SCV002725002 uncertain significance Hereditary cancer-predisposing syndrome 2024-02-26 criteria provided, single submitter clinical testing The p.Y749C variant (also known as c.2246A>G), located in coding exon 22 of the RB1 gene, results from an A to G substitution at nucleotide position 2246. The tyrosine at codon 749 is replaced by cysteine, an amino acid with highly dissimilar properties. This amino acid position is well conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Based on the available evidence, the clinical significance of this alteration remains unclear.
Labcorp Genetics (formerly Invitae), Labcorp RCV003626787 SCV004520921 uncertain significance Retinoblastoma 2023-08-19 criteria provided, single submitter clinical testing This sequence change replaces tyrosine, which is neutral and polar, with cysteine, which is neutral and slightly polar, at codon 749 of the RB1 protein (p.Tyr749Cys). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with RB1-related conditions. ClinVar contains an entry for this variant (Variation ID: 1788344). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt RB1 protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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