ClinVar Miner

Submissions for variant NM_000321.3(RB1):c.2461A>G (p.Thr821Ala)

gnomAD frequency: 0.00002  dbSNP: rs761015353
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001208925 SCV001380339 uncertain significance Retinoblastoma 2019-09-13 criteria provided, single submitter clinical testing This sequence change replaces threonine with alanine at codon 821 of the RB1 protein (p.Thr821Ala). The threonine residue is moderately conserved and there is a small physicochemical difference between threonine and alanine. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0"). This variant has not been reported in the literature in individuals with RB1-related conditions. This variant is present in population databases (rs761015353, ExAC 0.02%).
Ambry Genetics RCV004033749 SCV005034594 likely benign Hereditary cancer-predisposing syndrome 2023-10-21 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

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