ClinVar Miner

Submissions for variant NM_000321.3(RB1):c.264G>C (p.Leu88Phe)

dbSNP: rs1952090786
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001228573 SCV001400976 uncertain significance Retinoblastoma 2021-07-26 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Nucleotide substitutions within the consensus splice site are a relatively common cause of aberrant splicing (PMID: 17576681, 9536098). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site, but this prediction has not been confirmed by published transcriptional studies. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated, but these predictions have not been confirmed by published functional studies and their clinical significance is uncertain. This variant has not been reported in the literature in individuals with RB1-related conditions. This variant is not present in population databases (ExAC no frequency). This sequence change replaces leucine with phenylalanine at codon 88 of the RB1 protein (p.Leu88Phe). The leucine residue is moderately conserved and there is a small physicochemical difference between leucine and phenylalanine. This variant also falls at the last nucleotide of exon 2 of the RB1 coding sequence, which is part of the consensus splice site for this exon.

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