ClinVar Miner

Submissions for variant NM_000368.5(TSC1):c.2023G>A (p.Asp675Asn)

dbSNP: rs768189353
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000469642 SCV000552365 likely benign Tuberous sclerosis 1 2023-10-06 criteria provided, single submitter clinical testing
Ambry Genetics RCV002418418 SCV002720406 uncertain significance Hereditary cancer-predisposing syndrome 2024-04-24 criteria provided, single submitter clinical testing The p.D675N variant (also known as c.2023G>A), located in coding exon 14 of the TSC1 gene, results from a G to A substitution at nucleotide position 2023. The aspartic acid at codon 675 is replaced by asparagine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
All of Us Research Program, National Institutes of Health RCV004001909 SCV004842735 uncertain significance Tuberous sclerosis syndrome 2023-12-18 criteria provided, single submitter clinical testing This missense variant replaces aspartic acid with asparagine at codon 675 of the TSC1 protein. Computational prediction is inconclusive regarding the impact of this variant on protein structure and function (internally defined REVEL score threshold 0.5 < inconclusive < 0.7, PMID: 27666373). To our knowledge, functional studies have not been reported for this variant. This variant has not been reported in individuals affected with TSC1-related disorders in the literature. This variant has not been identified in the general population by the Genome Aggregation Database (gnomAD). The available evidence is insufficient to determine the role of this variant in disease conclusively. Therefore, this variant is classified as a Variant of Uncertain Significance.

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