ClinVar Miner

Submissions for variant NM_000372.5(TYR):c.157G>T (p.Gly53Cys)

dbSNP: rs1591133731
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV002533981 SCV002951262 pathogenic not provided 2023-07-17 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. This variant disrupts the p.Gly53 amino acid residue in TYR. Other variant(s) that disrupt this residue have been determined to be pathogenic (Invitae). This suggests that this residue is clinically significant, and that variants that disrupt this residue are likely to be disease-causing. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt TYR protein function. ClinVar contains an entry for this variant (Variation ID: 627594). This missense change has been observed in individual(s) with oculocutaneous albinism (PMID: 31229681, 32552135). In at least one individual the data is consistent with being in trans (on the opposite chromosome) from a pathogenic variant. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces glycine, which is neutral and non-polar, with cysteine, which is neutral and slightly polar, at codon 53 of the TYR protein (p.Gly53Cys).
Center of Medical Genetics, Central South University RCV000851370 SCV000902461 likely pathogenic Tyrosinase-negative oculocutaneous albinism 2019-03-26 no assertion criteria provided clinical testing

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