ClinVar Miner

Submissions for variant NM_000383.4(AIRE):c.371C>T (p.Pro124Leu)

gnomAD frequency: 0.00010  dbSNP: rs193922417
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV002509170 SCV000051958 uncertain significance not specified 2022-12-28 criteria provided, single submitter clinical testing Variant summary: AIRE c.371C>T (p.Pro124Leu) results in a non-conservative amino acid change in the encoded protein sequence. Four of five in-silico tools predict a benign effect of the variant on protein function. The variant allele was found at a frequency of 0.00026 in 246854 control chromosomes (gnomAD). This frequency is not significantly higher than expected for a pathogenic variant in AIRE causing Autoimmune Polyglandular Syndrome Type 1 (0.00026 vs 0.0028), allowing no conclusion about variant significance. c.371C>T has been reported in the literature in individuals affected with Autoimmune Polyglandular Syndrome Type 1 (Zheng_2020, Ruan_2021), however, these reports do not provide unequivocal conclusions about association of the variant with Autoimmune Polyglandular Syndrome Type 1. To our knowledge, no experimental evidence demonstrating an impact on protein function has been reported. Two ClinVar submitters have assessed the variant since 2014: one classified the variant as uncertain significance and one as likely benign. Based on the evidence outlined above, the variant was classified as uncertain significance.
Blueprint Genetics RCV000788159 SCV000927181 uncertain significance not provided 2017-02-27 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000029312 SCV001082910 likely benign Polyglandular autoimmune syndrome, type 1 2025-01-21 criteria provided, single submitter clinical testing

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