ClinVar Miner

Submissions for variant NM_000388.4(CASR):c.1390C>G (p.Leu464Val)

dbSNP: rs778165189
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001368805 SCV001565218 uncertain significance Familial hypocalciuric hypercalcemia; Autosomal dominant hypocalcemia 1 2023-06-09 criteria provided, single submitter clinical testing An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be disruptive. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. ClinVar contains an entry for this variant (Variation ID: 1059510). This variant has not been reported in the literature in individuals affected with CASR-related conditions. This variant is present in population databases (rs778165189, gnomAD 0.0009%). This sequence change replaces leucine, which is neutral and non-polar, with valine, which is neutral and non-polar, at codon 464 of the CASR protein (p.Leu464Val).
Fulgent Genetics, Fulgent Genetics RCV002476682 SCV002778629 uncertain significance Familial hypocalciuric hypercalcemia 1; Neonatal severe primary hyperparathyroidism; Epilepsy, idiopathic generalized, susceptibility to, 8; Autosomal dominant hypocalcemia 1 2022-02-25 criteria provided, single submitter clinical testing
Ambry Genetics RCV004037059 SCV005034762 uncertain significance Nephrolithiasis/nephrocalcinosis 2023-04-19 criteria provided, single submitter clinical testing The p.L464V variant (also known as c.1390C>G), located in coding exon 4 of the CASR gene, results from a C to G substitution at nucleotide position 1390. The leucine at codon 464 is replaced by valine, an amino acid with highly similar properties. This amino acid position is highly conserved in available vertebrate species. In addition, this alteration is predicted to be deleterious by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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