ClinVar Miner

Submissions for variant NM_000388.4(CASR):c.1553G>A (p.Gly518Glu)

gnomAD frequency: 0.00001  dbSNP: rs377233360
Minimum review status: Collection method:
Minimum conflict level:
ClinVar version:
Total submissions: 2
Download table as spreadsheet
Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001052412 SCV001216622 uncertain significance Familial hypocalciuric hypercalcemia; Autosomal dominant hypocalcemia 1 2021-03-15 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive, but these predictions have not been confirmed by published functional studies and their clinical significance is uncertain. This variant has not been reported in the literature in individuals with CASR-related conditions. This variant is present in population databases (rs377233360, ExAC 0.01%). This sequence change replaces glycine with glutamic acid at codon 518 of the CASR protein (p.Gly518Glu). The glycine residue is highly conserved and there is a moderate physicochemical difference between glycine and glutamic acid.
Ambry Genetics RCV004031642 SCV002704881 uncertain significance Nephrolithiasis/nephrocalcinosis 2023-12-10 criteria provided, single submitter clinical testing The p.G518E variant (also known as c.1553G>A), located in coding exon 4 of the CASR gene, results from a G to A substitution at nucleotide position 1553. The glycine at codon 518 is replaced by glutamic acid, an amino acid with similar properties. This amino acid position is highly conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.