ClinVar Miner

Submissions for variant NM_000388.4(CASR):c.1999T>C (p.Phe667Leu)

dbSNP: rs1576877276
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000816749 SCV000957272 uncertain significance Familial hypocalciuric hypercalcemia; Autosomal dominant hypocalcemia 1 2021-12-14 criteria provided, single submitter clinical testing This sequence change replaces phenylalanine, which is neutral and non-polar, with leucine, which is neutral and non-polar, at codon 667 of the CASR protein (p.Phe667Leu). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated. ClinVar contains an entry for this variant (Variation ID: 659706). This variant has not been reported in the literature in individuals affected with CASR-related conditions. This variant is not present in population databases (gnomAD no frequency).
Ambry Genetics RCV002415916 SCV002721777 uncertain significance Inborn genetic diseases; Nephrolithiasis/nephrocalcinosis 2022-03-23 criteria provided, single submitter clinical testing The p.F667L variant (also known as c.1999T>C), located in coding exon 6 of the CASR gene, results from a T to C substitution at nucleotide position 1999. The phenylalanine at codon 667 is replaced by leucine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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