ClinVar Miner

Submissions for variant NM_000393.5(COL5A2):c.1976C>T (p.Pro659Leu)

gnomAD frequency: 0.00037  dbSNP: rs145404046
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Total submissions: 8
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Blueprint Genetics RCV000196178 SCV000188742 likely benign not specified 2015-10-08 criteria provided, single submitter clinical testing
GeneDx RCV000766820 SCV000249962 uncertain significance not provided 2023-04-05 criteria provided, single submitter clinical testing In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; This variant is associated with the following publications: (PMID: 32161841, 33161638)
Ambry Genetics RCV002310717 SCV000319685 likely benign Familial thoracic aortic aneurysm and aortic dissection 2019-01-14 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Invitae RCV002228512 SCV000631573 likely benign Ehlers-Danlos syndrome, classic type, 1 2023-12-30 criteria provided, single submitter clinical testing
Center for Human Genetics, Inc, Center for Human Genetics, Inc RCV000659476 SCV000781291 uncertain significance Connective tissue disorder 2016-11-01 criteria provided, single submitter clinical testing
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV002277281 SCV002565810 uncertain significance Ehlers-Danlos syndrome 2021-11-02 criteria provided, single submitter clinical testing
Revvity Omics, Revvity RCV003144137 SCV003833741 uncertain significance Ehlers-Danlos syndrome, classic type, 2 2019-05-03 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV003905244 SCV004720928 likely benign COL5A2-related condition 2020-07-18 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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