ClinVar Miner

Submissions for variant NM_000393.5(COL5A2):c.198T>C (p.Asn66=)

gnomAD frequency: 0.00306  dbSNP: rs76511879
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Total submissions: 11
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000175593 SCV000167953 benign not specified 2013-02-28 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Eurofins Ntd Llc (ga) RCV000175593 SCV000227108 benign not specified 2015-06-08 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV000175593 SCV000303980 likely benign not specified criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000351535 SCV000425672 likely benign Ehlers-Danlos syndrome type 7A 2016-06-14 criteria provided, single submitter clinical testing
Invitae RCV000757124 SCV000559002 benign Ehlers-Danlos syndrome, classic type, 1 2024-01-31 criteria provided, single submitter clinical testing
Ambry Genetics RCV002312867 SCV000738385 benign Familial thoracic aortic aneurysm and aortic dissection 2015-08-18 criteria provided, single submitter clinical testing This alteration is classified as benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Center for Human Genetics, Inc, Center for Human Genetics, Inc RCV000659467 SCV000781282 likely benign Connective tissue disorder 2016-11-01 criteria provided, single submitter clinical testing
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000999753 SCV000885246 benign Ehlers-Danlos syndrome, classic type, 2 2023-11-08 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000999753 SCV001297208 benign Ehlers-Danlos syndrome, classic type, 2 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV002277241 SCV002565811 benign Ehlers-Danlos syndrome 2022-01-14 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000175593 SCV004028669 benign not specified 2023-07-21 criteria provided, single submitter clinical testing

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