ClinVar Miner

Submissions for variant NM_000393.5(COL5A2):c.4295A>T (p.Asp1432Val)

gnomAD frequency: 0.00075  dbSNP: rs141777954
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Total submissions: 9
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000197286 SCV000249991 likely benign not specified 2018-02-02 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Invitae RCV002229472 SCV000284819 likely benign Ehlers-Danlos syndrome, classic type, 1 2024-01-26 criteria provided, single submitter clinical testing
Ambry Genetics RCV002315573 SCV000738689 likely benign Familial thoracic aortic aneurysm and aortic dissection 2017-03-29 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Mendelics RCV000986957 SCV001136119 likely benign Ehlers-Danlos syndrome, classic type 2019-05-28 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV001137059 SCV001296954 likely benign Ehlers-Danlos syndrome, classic type, 2 2018-03-07 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases allowed determination this variant is unlikely to cause disease. Therefore, this variant is classified as likely benign.
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV002277502 SCV002565841 likely benign Ehlers-Danlos syndrome 2019-12-01 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV003437001 SCV004148279 benign not provided 2022-12-01 criteria provided, single submitter clinical testing COL5A2: BP4, BS1, BS2
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000197286 SCV004223708 likely benign not specified 2023-11-13 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV003927821 SCV004742354 benign COL5A2-related condition 2020-06-23 criteria provided, single submitter clinical testing This variant is classified as benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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