ClinVar Miner

Submissions for variant NM_000419.5(ITGA2B):c.1105C>G (p.His369Asp)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV003240960 SCV003943025 uncertain significance Inborn genetic diseases 2023-05-17 criteria provided, single submitter clinical testing The c.1105C>G (p.H369D) alteration is located in exon 12 (coding exon 12) of the ITGA2B gene. This alteration results from a C to G substitution at nucleotide position 1105, causing the histidine (H) at amino acid position 369 to be replaced by an aspartic acid (D). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.
Labcorp Genetics (formerly Invitae), Labcorp RCV003500822 SCV004263944 uncertain significance Glanzmann thrombasthenia 2024-01-25 criteria provided, single submitter clinical testing This sequence change replaces histidine, which is basic and polar, with aspartic acid, which is acidic and polar, at codon 369 of the ITGA2B protein (p.His369Asp). This variant is present in population databases (rs374323511, gnomAD 0.006%). This variant has not been reported in the literature in individuals affected with ITGA2B-related conditions. ClinVar contains an entry for this variant (Variation ID: 2515858). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt ITGA2B protein function with a negative predictive value of 80%. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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