Total submissions: 1
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Clin |
RCV002511549 | SCV002820946 | uncertain significance | Glanzmann thrombasthenia | 2024-04-16 | reviewed by expert panel | curation | The NM_000419.5:c.2254C>G variant in ITGA2B is a missense variant predicted to cause substitution of leucine by valine at amino acid 752 (p.Leu752Val). At least one patient (Patient GM in PMID: 12083483) with this variant displayed mucocutaneous bleeding and impaired aggregation with all agonists except ristocetin, which is highly specific for Glanzmann thrombasthenia. Additionally, αIIbβ3 surface expression was reduced to <10% as measured by flow cytometry (PP4_Moderate). Although this variant was reported in homozygosity in two individuals (Patients GM and PV in PMID: 12083483), PM3 was not applied at any level of strength because additional ITGA2B variants were also observed in both individuals (c.1139G>A (p.Gly380Asp) in heterozygosity in GM; c.2264G>C (p.Arg755Pro) in homozygosity in both GM and PV). The variant is absent from gnomADv4.0 (PM2_Supporting). Another missense variant (ITGA2B c.2255T>G (p.Leu752Arg)) in the same codon has been classified as pathogenic for Glanzmann thrombasthenia by the ClinGen Platelet Disorders VCEP (PM5). In summary, this variant meets criteria to be classified as uncertain significance for autosomal recessive Glanzmann Thrombasthenia based on the ACMG/AMP criteria applied, as specified by the ClinGen PD-VCEP: PM2_Supporting, PM5, PP4_Moderate. (VCEP specifications version 2; date of approval 04/16/2024) |