Total submissions: 1
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Clin |
RCV001290461 | SCV001478497 | likely pathogenic | Glanzmann thrombasthenia | 2023-05-16 | reviewed by expert panel | curation | The NM_000419.5(ITGA2B):c.3017dup (p.Gly1007TrpfsTer29) frameshift variant alters around 50% of the transmembrane domain of GPIIb, which has been defined as a region critical to protein function (PVS1_strong). It has been observed in one compound heterozygous GT patient in trans with Tyr471Ter (classified Pathogenic by the PD-VCEP; PM3) as well as one additional family member (PMID: 9798966). It is found at a low allele frequency of 0.00002892 in the gnomAD Latino population (PM2_supporting). In summary, this variant meets the criteria to be classified as likely pathogenic for autosomal recessive Glanzmann Thrombasthenia based on the ACMG/AMP criteria applied, as specified by the ClinGen PD VCEP: PM2_Supporting, PM3, PVS1_strong (PD VCEP specifications version 2.1). |