ClinVar Miner

Submissions for variant NM_000435.3(NOTCH3):c.1135T>G (p.Cys379Gly)

dbSNP: rs1555729105
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Athena Diagnostics Inc RCV000517409 SCV000614212 pathogenic not provided 2017-03-17 criteria provided, single submitter clinical testing
Invitae RCV000517409 SCV002293354 likely pathogenic not provided 2021-09-24 criteria provided, single submitter clinical testing In summary, the currently available evidence indicates that the variant is pathogenic, but additional data are needed to prove that conclusively. Therefore, this variant has been classified as Likely Pathogenic. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt NOTCH3 protein function. ClinVar contains an entry for this variant (Variation ID: 447776). This missense change has been observed in individual(s) with clinical features of cerebral arteriopathy with subcortical infarcts and leukoencephalopathy (PMID: 21616505). It has also been observed to segregate with disease in related individuals. This variant is not present in population databases (ExAC no frequency). This sequence change replaces cysteine with glycine at codon 379 of the NOTCH3 protein (p.Cys379Gly). The cysteine residue is highly conserved and there is a large physicochemical difference between cysteine and glycine.

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