ClinVar Miner

Submissions for variant NM_000436.4(OXCT1):c.955+4T>G

dbSNP: rs1579774376
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000823826 SCV000964696 uncertain significance Succinyl-CoA acetoacetate transferase deficiency 2018-12-04 criteria provided, single submitter clinical testing This sequence change falls in intron 9 of the OXCT1 gene. It does not directly change the encoded amino acid sequence of the OXCT1 protein, but it affects a nucleotide within the consensus splice site of the intron. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals with OXCT1-related conditions. Nucleotide substitutions within the consensus splice site are a relatively common cause of aberrant splicing (PMID: 17576681, 9536098). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site, but this prediction has not been confirmed by published transcriptional studies. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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