ClinVar Miner

Submissions for variant NM_000455.5(STK11):c.1217C>G (p.Ala406Gly)

dbSNP: rs748202003
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV001010375 SCV001170564 uncertain significance Hereditary cancer-predisposing syndrome 2022-04-13 criteria provided, single submitter clinical testing The p.A406G variant (also known as c.1217C>G), located in coding exon 9 of the STK11 gene, results from a C to G substitution at nucleotide position 1217. The alanine at codon 406 is replaced by glycine, an amino acid with similar properties. This amino acid position is not well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Invitae RCV001050408 SCV001214513 uncertain significance Peutz-Jeghers syndrome 2023-07-07 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt STK11 protein function. ClinVar contains an entry for this variant (Variation ID: 818617). This variant has not been reported in the literature in individuals affected with STK11-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces alanine, which is neutral and non-polar, with glycine, which is neutral and non-polar, at codon 406 of the STK11 protein (p.Ala406Gly).
Genome-Nilou Lab RCV001050408 SCV002057974 uncertain significance Peutz-Jeghers syndrome 2021-07-15 criteria provided, single submitter clinical testing
Center for Genomic Medicine, Rigshospitalet, Copenhagen University Hospital RCV002465820 SCV002761033 uncertain significance not specified 2023-08-15 criteria provided, single submitter clinical testing
Baylor Genetics RCV003467590 SCV004205543 uncertain significance Melanoma, cutaneous malignant, susceptibility to, 1 2023-10-10 criteria provided, single submitter clinical testing

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