ClinVar Miner

Submissions for variant NM_000455.5(STK11):c.318G>T (p.Arg106=)

dbSNP: rs777784520
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Total submissions: 8
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV000223178 SCV000277436 likely benign Hereditary cancer-predisposing syndrome 2015-07-24 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Color Diagnostics, LLC DBA Color Health RCV000223178 SCV000686633 likely benign Hereditary cancer-predisposing syndrome 2016-05-31 criteria provided, single submitter clinical testing
GeneDx RCV000611475 SCV000722837 likely benign not specified 2017-09-14 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000611475 SCV000918292 likely benign not specified 2019-08-29 criteria provided, single submitter clinical testing
Invitae RCV000932561 SCV001078245 likely benign Peutz-Jeghers syndrome 2024-01-31 criteria provided, single submitter clinical testing
Quest Diagnostics Nichols Institute San Juan Capistrano RCV003477753 SCV004221278 uncertain significance not provided 2022-12-19 criteria provided, single submitter clinical testing To the best of our knowledge, the variant has not been reported in the published literature. The frequency of this variant in the general population, 0.000004 (1/249166 chromosomes, http://gnomad.broadinstitute.org), is uninformative in assessment of its pathogenicity. Analysis of this variant using software algorithms for the prediction of the effect of nucleotide changes on splicing yielded predictions that this variant does not affect STK11 mRNA splicing . Based on the available information, we are unable to determine the clinical significance of this variant.
CHEO Genetics Diagnostic Laboratory, Children's Hospital of Eastern Ontario RCV003491983 SCV004239719 likely benign Breast and/or ovarian cancer 2022-10-06 criteria provided, single submitter clinical testing
All of Us Research Program, National Institutes of Health RCV000932561 SCV004816341 likely benign Peutz-Jeghers syndrome 2024-01-03 criteria provided, single submitter clinical testing

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