Total submissions: 6
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Soonchunhyang University Bucheon Hospital, |
RCV000019886 | SCV000267207 | uncertain significance | Hyperthyroxinemia, familial dysalbuminemic | 2016-03-18 | criteria provided, single submitter | reference population | |
Gene |
RCV001753423 | SCV001986354 | uncertain significance | not provided | 2021-04-08 | criteria provided, single submitter | clinical testing | Reported in many patients with familial dysalbuminemic hyperthyroxinemia (Petersen et al., 1994; Choudhary et al., 2015; Cho et al., 2017; Khoo et al., 2020); Also reported as R218H due to alternate nomenclature; In silico analysis supports that this missense variant does not alter protein structure/function; This variant is associated with the following publications: (PMID: 26522458, 30027432, 9329347, 11743520, 27834068, 24646103, 24494774, 8048949, 12743361, 19723509, 25153218, 28781323, 26169058, 29676214, 32101523, 30197844, 29133890, 8064810, 12099390) |
Invitae | RCV001753423 | SCV003251568 | uncertain significance | not provided | 2023-01-22 | criteria provided, single submitter | clinical testing | In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Experimental studies have shown that this missense change affects ALB function (PMID: 12743361). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt ALB protein function. ClinVar contains an entry for this variant (Variation ID: 18225). This variant is also known as R218H. This missense change has been observed in individual(s) with dysalbuminemic hyperthyroxinemia (PMID: 8048949, 12099390, 26169058, 29676214, 33728390). This variant is present in population databases (rs75002628, gnomAD 0.01%). This sequence change replaces arginine, which is basic and polar, with histidine, which is basic and polar, at codon 242 of the ALB protein (p.Arg242His). |
3billion | RCV000019886 | SCV004013589 | uncertain significance | Hyperthyroxinemia, familial dysalbuminemic | criteria provided, single submitter | clinical testing | The variant is observed at an extremely low frequency in the gnomAD v2.1.1 dataset (total allele frequency: 0.007%). Same nucleotide change resulting in same amino acid change has been previously reported to be associated with ALB related disorder (Also known as Arg218His. PMID: 8048949). Different missense changes at the same codon (p.Arg242Pro, p.Arg242Ser) have been reported to be associated with ALB related disorder (ClinVar ID: VCV000018238 / PMID: 24494774, 9329347). However the evidence of pathogenicity is insufficient at this time. Therefore, this variant is classified as Uncertain significance according to the recommendation of ACMG/AMP guideline. | |
Women's Health and Genetics/Laboratory Corporation of America, |
RCV003398549 | SCV004122526 | uncertain significance | not specified | 2023-10-05 | criteria provided, single submitter | clinical testing | Variant summary: ALB c.725G>A (p.Arg242His) results in a non-conservative amino acid change located in the Serum albumin, N-terminal (IPR014760) of the encoded protein sequence. Four of five in-silico tools predict a benign effect of the variant on protein function. The variant allele was found at a frequency of 7.2e-05 in 251392 control chromosomes. This frequency is not significantly higher than estimated for a pathogenic variant in ALB causing Analbuminemia (7.2e-05 vs ND), allowing no conclusion about variant significance. c.725G>A has been reported in the literature in individuals affected with Dysalbuminaemic hyperthyroxinaemia (e.g. Cho_2017, Ryan_2016, Sunthornthepvarakul_1994, Petersen_1994) . These reports do not provide unequivocal conclusions about association of the variant with Analbuminemia. To our knowledge, no experimental evidence demonstrating an impact on protein function has been reported. The following publications have been ascertained in the context of this evaluation (PMID: 27834068, 8064810, 26169058, 8048949). Three submitters have cited clinical-significance assessments for this variant to ClinVar after 2014. All submitters classified the variant as uncertain significance. Based on the evidence outlined above, the variant was classified as uncertain significance. |
OMIM | RCV000019886 | SCV000040184 | pathogenic | Hyperthyroxinemia, familial dysalbuminemic | 2001-12-01 | no assertion criteria provided | literature only |