Submissions for variant NM_000492.4(CFTR):c.4389G>A (p.Gln1463=)

gnomAD frequency: 0.23407  dbSNP: rs1800136

Total submissions: 19

Submitter	RCV	SCV	Clinical significance	Condition	Last evaluated	Review status	Method	Comment
Eurofins Ntd Llc (ga)	RCV000079007	SCV000110876	benign	not specified	2018-01-25	criteria provided, single submitter	clinical testing
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine	RCV000079007	SCV000197443	benign	not specified	2013-09-27	criteria provided, single submitter	clinical testing	Gln1463Gln in exon 27 of CFTR: This variant does not alter an amino acid and is not in a consensus splice sequence. It was identified in 21.6% (1861/8600) of European American and 24.4% (1077/4406) of African American chromosomose from a broad population screened by the NHLBI Exome Sequencing Project (http://evs.gs.w ashington.edu).
PreventionGenetics, part of Exact Sciences	RCV000079007	SCV000304499	benign	not specified		criteria provided, single submitter	clinical testing
Illumina Laboratory Services, Illumina	RCV001095184	SCV000466531	likely benign	CFTR-related disorders	2017-04-27	criteria provided, single submitter	clinical testing	This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases allowed determination this variant is unlikely to cause disease. Therefore, this variant is classified as likely benign.
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories	RCV001811359	SCV000602976	benign	not provided	2022-09-16	criteria provided, single submitter	clinical testing
GeneDx	RCV000079007	SCV000729755	benign	not specified	2018-02-07	criteria provided, single submitter	clinical testing	This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Invitae	RCV000353586	SCV001000412	benign	Cystic fibrosis	2024-02-01	criteria provided, single submitter	clinical testing
CFTR-France	RCV000353586	SCV001169201	benign	Cystic fibrosis	2018-01-29	criteria provided, single submitter	curation	the variant does not result in CFTR-RD neither
Ambry Genetics	RCV000353586	SCV001184133	benign	Cystic fibrosis	2014-11-19	criteria provided, single submitter	clinical testing	This alteration is classified as benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Genome-Nilou Lab	RCV000353586	SCV001748541	benign	Cystic fibrosis	2021-07-01	criteria provided, single submitter	clinical testing
Genome Diagnostics Laboratory, The Hospital for Sick Children	RCV000353586	SCV002507317	benign	Cystic fibrosis	2019-07-23	criteria provided, single submitter	clinical testing
Sema4, Sema4	RCV002256041	SCV002529733	benign	Hereditary pancreatitis	2020-02-24	criteria provided, single submitter	curation
Genetic Services Laboratory, University of Chicago	RCV000079007	SCV000150656	likely benign	not specified		no assertion criteria provided	clinical testing	Likely benign based on allele frequency in 1000 Genomes Project or ESP global frequency and its presence in a patient with a rare or unrelated disease phenotype. NOT Sanger confirmed.
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen	RCV000079007	SCV001740204	benign	not specified		no assertion criteria provided	clinical testing
Genome Diagnostics Laboratory, University Medical Center Utrecht	RCV000079007	SCV001929943	benign	not specified		no assertion criteria provided	clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center	RCV000079007	SCV001965616	benign	not specified		no assertion criteria provided	clinical testing
Natera, Inc.	RCV001095184	SCV002075982	benign	CFTR-related disorders	2017-03-29	no assertion criteria provided	clinical testing
Genome Diagnostics Laboratory, The Hospital for Sick Children	RCV001095184	SCV002507401	benign	CFTR-related disorders	2019-07-23	no assertion criteria provided	clinical testing
Payam Genetics Center, General Welfare Department of North Khorasan Province	RCV000353586	SCV003852759	benign	Cystic fibrosis	2023-03-01	no assertion criteria provided	clinical testing