Total submissions: 2
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Unidade de Eritropatologia e Metabolismo do Ferro, |
RCV001175128 | SCV001251649 | pathogenic | Erythrocytosis, familial, 6 | 2019-11-01 | criteria provided, single submitter | case-control | The Asp100Glu variant in HBB is a high oxygen affinity hemoglobin described first in members of a Portuguese family. The altered functional properties of this variant likely result from the inability to form a hydrogen bond between beta-chain aa 100Glu and alpha-chain aa 43Tyr; such a bond is formed in deoxy Hb A between the normally occurring beta 100Asp and alpha 43Tyr. The affected members have a distinct erythrocytosis with high hemoglobin levels. |
Women's Health and Genetics/Laboratory Corporation of America, |
RCV003226436 | SCV003922705 | uncertain significance | not specified | 2023-03-22 | criteria provided, single submitter | clinical testing | Variant summary: HBB c.300T>A (p.Asp100Glu) results in a conservative amino acid change in the encoded protein sequence. Four of five in-silico tools predict a damaging effect of the variant on protein function. The variant was absent in 251404 control chromosomes (gnomAD). The available data on variant occurrences in the general population are insufficient to allow any conclusion about variant significance. The variant, c.300T>A, (also known as Asp99Glu or Hb Coimbra) is a known high oxygen affinity hemoglobin variant, and is reported in several heterozygotes, who were mostly asymptomatic and had compensatory erythrocytosis found in routine blood tests (e.g. Tamagnini_1991, Bento_2013, Oliveira_2018). To our knowledge, no homozygous occurrences or compound heterozygosity with pathogenic HBB variants were reported, therefore no clear conclusions about association of the variant with Hemoglobinopathy can be made. Publications reported experimental evidence evaluating samples from heterozygous carriers, and demonstrated that the variant resulted in an increase in oxygen affinity (Tamagnini_1991, Jorge_2018), but no differences in Bohr effect were found (Jorge_2018). One submitter has provided clinical-significance assessments for this variant to ClinVar after 2014 and classified the variant as pathogenic for Erythrocytosis. Based on the evidence outlined above, the variant was classified as uncertain significance. |