ClinVar Miner

Submissions for variant NM_000521.4(HEXB):c.1535_1536del (p.Arg512fs)

dbSNP: rs794727091
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000724463 SCV000225797 pathogenic not provided 2014-12-10 criteria provided, single submitter clinical testing
Counsyl RCV000174488 SCV000798302 likely pathogenic Sandhoff disease 2018-03-06 criteria provided, single submitter clinical testing
Invitae RCV000174488 SCV000964142 pathogenic Sandhoff disease 2023-12-09 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Arg512Thrfs*12) in the HEXB gene. While this is not anticipated to result in nonsense mediated decay, it is expected to disrupt the last 45 amino acid(s) of the HEXB protein. This variant is present in population databases (rs794727091, gnomAD 0.006%). This premature translational stop signal has been observed in individual(s) with Sandhoff disease (PMID: 29448188). ClinVar contains an entry for this variant (Variation ID: 194180). This variant disrupts a region of the HEXB protein in which other variant(s) (p.Cys534*) have been determined to be pathogenic (PMID: 29448188, 30075786). This suggests that this is a clinically significant region of the protein, and that variants that disrupt it are likely to be disease-causing. For these reasons, this variant has been classified as Pathogenic.
Daryl Scott Lab, Baylor College of Medicine RCV000174488 SCV004102696 uncertain significance Sandhoff disease 2023-11-10 criteria provided, single submitter clinical testing
Natera, Inc. RCV000174488 SCV002084953 likely pathogenic Sandhoff disease 2021-01-10 no assertion criteria provided clinical testing

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