ClinVar Miner

Submissions for variant NM_000527.5(LDLR):c.1706-2A>T

dbSNP: rs878854027
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV002229340 SCV000285017 pathogenic Familial hypercholesterolemia 2021-04-04 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. Studies have shown that this variant is associated with a 10 nucleotide deletion in exon 12, which introduces a premature termination codon (PMID: 22129472). The resulting mRNA is expected to undergo nonsense-mediated decay. This variant has been observed in individual(s) with familial hypercholesterolemia (PMID: 22129472). It has also been observed to segregate with disease in related individuals. ClinVar contains an entry for this variant (Variation ID: 237865). This variant is not present in population databases (ExAC no frequency). This sequence change affects an acceptor splice site in intron 11 of the LDLR gene. RNA analysis indicates that this variant induces altered splicing and may result in an absent or disrupted protein product.
LDLR-LOVD, British Heart Foundation RCV000231584 SCV000295601 pathogenic Hypercholesterolemia, familial, 1 2016-03-25 criteria provided, single submitter literature only
Centre de Génétique Moléculaire et Chromosomique, Unité de génétique de l'Obésité et des Dyslipidémies, APHP, GH Hôpitaux Universitaires Pitié-Salpêtrière / Charles-Foix RCV000231584 SCV000503395 pathogenic Hypercholesterolemia, familial, 1 2016-12-16 criteria provided, single submitter clinical testing subject mutated among 2600 FH index cases screened = 1
Cardiovascular Research Group, Instituto Nacional de Saude Doutor Ricardo Jorge RCV000231584 SCV000599383 pathogenic Hypercholesterolemia, familial, 1 2016-03-01 criteria provided, single submitter curation
Laboratorium voor Moleculaire Diagnostiek Experimentele Vasculaire Geneeskunde, Academisch Medisch Centrum RCV000231584 SCV000606495 pathogenic Hypercholesterolemia, familial, 1 no assertion criteria provided research

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