ClinVar Miner

Submissions for variant NM_000527.5(LDLR):c.922G>A (p.Glu308Lys)

dbSNP: rs879254721
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
LDLR-LOVD, British Heart Foundation RCV000237337 SCV000295059 likely pathogenic Hypercholesterolemia, familial, 1 2016-03-25 criteria provided, single submitter literature only
Laboratory of molecular diagnosis of dyslipidemias, Università egli studi di Napoli Federico II RCV000237337 SCV001653612 likely pathogenic Hypercholesterolemia, familial, 1 2021-05-24 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV005238788 SCV005886466 likely pathogenic Familial hypercholesterolemia 2025-02-14 criteria provided, single submitter clinical testing Variant summary: LDLR c.922G>A (p.Glu308Lys) results in a conservative amino acid change located in the Low-density lipoprotein receptor domain of the encoded protein sequence. Four of five in-silico tools predict a damaging effect of the variant on protein function. The variant was absent in 251216 control chromosomes. c.922G>A has been reported in the literature in heterozygous individuals affected with Hypercholesterolemia (examples: Lombardi_2006, vanderGraaf_2011, Semenova_2020, Shakhtshneider_2021, Timoshchenko_2023, Rejman_2023). These data indicate that the variant is likely to be associated with disease. To our knowledge, no experimental evidence demonstrating an impact on protein function has been reported. The following publications have been ascertained in the context of this evaluation (PMID: 36752612, 16792510, 34834584, 21382890 , 32423031, 38203485). ClinVar contains an entry for this variant (Variation ID: 251528). Based on the evidence outlined above, the variant was classified as likely pathogenic.
Laboratorium voor Moleculaire Diagnostiek Experimentele Vasculaire Geneeskunde, Academisch Medisch Centrum RCV000237337 SCV000606270 pathogenic Hypercholesterolemia, familial, 1 no assertion criteria provided research

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